New Employer Payroll Setup: Step-by-Step Checklist for 2026
Get your EIN, register with Missouri, set up withholding, new hire reporting — the complete checklist.
Practical guides on MO payroll taxes, employer registration, SUI, minimum wage, and labor laws — written for small business owners, not accountants.
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Gusto, QuickBooks Payroll, Paychex, and ADP — compared honestly. Who each product is right for, where each falls short, and what to ask before you sign anything.
Get your EIN, register with Missouri, set up withholding, new hire reporting — the complete checklist.
New employer rate 2.51%, experienced range 0.00%6.00%, wage base $10,000.
Missouri minimum wage $13.75/hr. Missouris minimum wage is $13.75/hr, increasing to $15.00 by 2026. Tipped employees may be paid 50% of the minimum wage.
Missouri graduated 2%4.95% income tax, SUI on the first $10,000, and all employer tax obligations explained.
Get your EIN, register with Missouri, set up withholding, new hire reporting — the complete checklist.
New employer rate 2.51%, experienced range 0.00%6.00%, wage base $10,000.
Missouri minimum wage $13.75/hr. Missouris minimum wage is $13.75/hr, increasing to $15.00 by 2026. Tipped employees may be paid 50% of the minimum wage.
New employer rate 2.51%, experienced range 0.00%6.00%, wage base $10,000.
Missouri minimum wage $13.75/hr. Missouris minimum wage is $13.75/hr, increasing to $15.00 by 2026. Tipped employees may be paid 50% of the minimum wage.
Missouri graduated 2%4.95% income tax, SUI on the first $10,000, and all employer tax obligations explained.
Get your EIN, register with Missouri, set up withholding, new hire reporting — the complete checklist.
New employer rate 2.51%, experienced range 0.00%6.00%, wage base $10,000.
Missouri minimum wage $13.75/hr. Missouris minimum wage is $13.75/hr, increasing to $15.00 by 2026. Tipped employees may be paid 50% of the minimum wage.
IRS classification rules, Missouri-specific considerations, misclassification penalties.
Gusto vs Paychex vs QuickBooks vs ADP — detailed comparison for Missouri small businesses.
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This article is for general informational purposes only and does not constitute legal, tax, or professional advice. Employment laws, tax regulations, and compliance requirements change frequently. The information on this page reflects our understanding as of the date noted above and may not reflect recent changes in federal or Missouri state law. Do not act or refrain from acting based solely on the information in this article. Always consult a qualified attorney, CPA, or HR professional familiar with Missouri law before making payroll or compliance decisions for your business.
Missouri payroll changed significantly on January 1, 2026, when voters' approval of Proposition A took full effect. Proposition A raised the state minimum wage to $15.00 per hour — up from $12.30 in 2025 — and simultaneously introduced a mandatory paid sick leave requirement for most employers. These two changes represent the largest shift in Missouri's wage and hour landscape in years, and every employer operating in the state needs to understand both elements. The state income tax rate in 2026 is a flat 4.7%, applied to all taxable wages for Missouri residents and non-residents with Missouri-source income. Employers file the quarterly MO-941 return with the Missouri Department of Revenue to remit and reconcile withheld income tax.
Under Proposition A, employers with 15 or more employees must provide up to 56 hours of paid sick leave per year. Employers with fewer than 15 employees must provide up to 40 hours. Sick leave accrues at one hour for every 30 hours worked and may be used for the employee's own illness, a family member's illness, or absences related to domestic or sexual violence. Proposition A also preempts local governments from setting minimum wages above the new state floor — St. Louis and Kansas City cannot enact local minimums higher than $15.00. State Unemployment Insurance uses a $10,500 wage base with a new employer rate of 2.376%, for a maximum first-year SUI cost of $249.48 per worker. Learn how Missouri SUI experience rates are calculated and how Proposition A's sick leave requirements interact with existing PTO policies.
Missouri's minimum wage of $15.00 per hour applies to all covered private-sector employers beginning January 1, 2026. This is a significant jump from the prior year and requires payroll systems to be updated before the first January 2026 payroll run. Future annual increases beyond $15.00 are set by the CPI index, so the rate may adjust upward each January 1 in subsequent years. Missouri allows a tip credit: tipped employees may receive a direct cash wage of 50% of the state minimum wage per hour, provided that total hourly earnings including tips reach $15.00. If tips do not cover the shortfall, the employer must make up the difference in that workweek.
Missouri does not have a state paid family and medical leave program in 2026, which means employers only deal with the Proposition A sick leave obligation rather than a dual sick-leave-plus-PFML structure like some other states. However, the sick leave law under Proposition A is new enough that there is limited regulatory guidance on edge cases, and employers should monitor Missouri Department of Labor rulemaking through 2026 as the agency issues interpretive guidance. Read the full Missouri payroll compliance guide for Proposition A implementation guidance, sick leave recordkeeping requirements, and MO-941 filing instructions.
Final paycheck timing in Missouri requires that final wages be paid on the next regular payday following the employee's demand for payment after separation. For both discharged and resigned employees, the payment obligation is triggered by the employee's demand rather than automatically by the termination date. Missouri does not require same-day payment on discharge. New hire reporting must be submitted within 20 days of hire to the Missouri Family Support Division New Hire Reporting Center. Required information includes standard new hire data elements plus the employer's Missouri tax ID number.
For employers new to Missouri payroll, the January 2026 Proposition A changes are the most important items to have in place from day one. The flat income tax rate and moderate SUI wage base make the ongoing filing picture manageable, but the new sick leave law adds a tracking and recordkeeping layer that was not present in prior years. See the Missouri new employer registration guide for step-by-step instructions on setting up withholding and SUI accounts and configuring Proposition A sick leave tracking before your first payroll run.
Flat 4.7% income tax, $15/hr minimum wage (Prop A 2024), new Prop A paid sick leave (56 hrs/yr for employers 15+), SUI 0%–6.5% on $10,500. State preempts local minimums.
Quarterly deadlines, line-by-line walkthrough, deposit schedules, how to amend with Form 941-X, and penalties for late filing.
Minimum wage, overtime thresholds, white-collar exemption tests, child labor rules, recordkeeping, and DOL audit triggers.
New hire, every-payroll, monthly, quarterly, and annual federal compliance tasks in one organized checklist.